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Update to Enchantr 0.1.7 #278

Merged
merged 39 commits into from
Oct 16, 2023
Merged

Update to Enchantr 0.1.7 #278

merged 39 commits into from
Oct 16, 2023

Commits on Jun 30, 2023

  1. Template update for nf-core/tools version 2.9

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    nf-core-bot committed Jun 30, 2023
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Commits on Jul 23, 2023

  1. allow passing custom fields buildconsensus

    @ggabernet
    ggabernet committed Jul 23, 2023
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Commits on Jul 26, 2023

  1. updated config for threshold report with subsample

    @ssnn-airr
    ssnn-airr committed Jul 26, 2023
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Commits on Jul 27, 2023

  1. add default params to report threshold

    @ggabernet
    ggabernet committed Jul 27, 2023
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  2. fix igphyml param docs

    @ggabernet
    ggabernet committed Jul 27, 2023
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Commits on Jul 28, 2023

  1. partial fix for docker container

    @ggabernet
    ggabernet committed Jul 28, 2023
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  2. update changelog

    @ggabernet
    ggabernet committed Jul 28, 2023
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  3. update nextflow config

    @ggabernet
    ggabernet committed Jul 28, 2023
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  4. try fix docker singularity issue

    @ggabernet
    ggabernet committed Jul 28, 2023
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Commits on Jul 29, 2023

  1. add skip report threshold

    @ggabernet
    ggabernet committed Jul 29, 2023
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  2. fix param skip threshold

    @ggabernet
    ggabernet committed Jul 29, 2023
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  3. add immcantation container for dowser

    @ggabernet
    ggabernet committed Jul 29, 2023
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  4. Merge branch 'dev' of https://github.com/ggabernet/nf-core-airrflow i… 

    …nto dev
    @ggabernet
    ggabernet committed Jul 29, 2023
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Commits on Aug 1, 2023

  1. updated path for enchantr 0.1.4

    @ssnn-airr
    ssnn-airr committed Aug 1, 2023
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  2. Merge branch 'dev' into dev

    @ggabernet
    ggabernet authored Aug 1, 2023
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  3. Merge pull request #69 from immcantation/dev 

    Dev
    @ggabernet
    ggabernet authored Aug 1, 2023
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Commits on Aug 15, 2023

  1. Merge pull request #276 from ggabernet/dev 

    Short term fix issues Dowser singularity container
    @ggabernet
    ggabernet authored Aug 15, 2023
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Commits on Sep 18, 2023

  1. test immcantation suite prerelease

    @ggabernet
    ggabernet committed Sep 18, 2023
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  2. update path igphyml

    @ggabernet
    ggabernet committed Sep 18, 2023
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Commits on Sep 19, 2023

  1. change dowser lineages container

    @ggabernet
    ggabernet committed Sep 19, 2023
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Commits on Sep 25, 2023

  1. [automated] Fix linting with Prettier

    @nf-core-bot
    nf-core-bot committed Sep 25, 2023
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  2. fix editorconfig linting

    @ggabernet
    ggabernet committed Sep 25, 2023
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  3. Merge branch 'TEMPLATE' of https://github.com/nf-core/airrflow into m… 

    …erge-template-updates
    @ggabernet
    ggabernet committed Sep 25, 2023
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  4. add input schema

    @ggabernet
    ggabernet committed Sep 25, 2023
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  5. fix samplesheet validation

    @ggabernet
    ggabernet committed Sep 25, 2023
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  6. update nextflow ver

    @ggabernet
    ggabernet committed Sep 25, 2023
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  7. fix nextflow badge

    @ggabernet
    ggabernet committed Sep 25, 2023
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  8. fix lint errors

    @ggabernet
    ggabernet committed Sep 25, 2023
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  9. update to immcantation/airrflow container

    @ggabernet
    ggabernet committed Sep 25, 2023
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  10. update changelog

    @ggabernet
    ggabernet committed Sep 25, 2023
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  11. fix linting errors nf-core v2.10

    @ggabernet
    ggabernet committed Sep 25, 2023
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  12. Merge pull request #279 from ggabernet/merge-template-updates 

    merge nf-core tools template update
    @ggabernet
    ggabernet authored Sep 25, 2023
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Commits on Oct 13, 2023

  1. temporary inactivate validate params

    @ggabernet
    ggabernet committed Oct 13, 2023
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  2. dowser clones by cloneby

    @ggabernet
    ggabernet committed Oct 13, 2023
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  3. findthreshold optional output

    @ggabernet
    ggabernet committed Oct 13, 2023
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  4. report clones by cloneby

    @ggabernet
    ggabernet committed Oct 13, 2023
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  5. fix tcr tests

    @ggabernet
    ggabernet committed Oct 13, 2023
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  6. allow whitespace in tissue

    @ggabernet
    ggabernet committed Oct 13, 2023
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Commits on Oct 14, 2023

  1. fix lint

    @ggabernet
    ggabernet committed Oct 14, 2023
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