Merge pull request #324 from suzannejin/dev-ratio-plot-exploratory

shorten test_experimental into the essential tests
nf-core · Oct 28, 2024 · 0329206 · 0329206
2 parents 3c8be72 + e345168
commit 0329206
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/conf/test_experimental.config b/conf/test_experimental.config
@@ -29,7 +29,7 @@ params {
     input = 'https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/genomics/mus_musculus/rnaseq_expression/SRP254919.samplesheet.csv'
     matrix =  'https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/genomics/mus_musculus/rnaseq_expression/SRP254919.salmon.merged.gene_counts.top1000cov.tsv'
     contrasts =  'https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/genomics/mus_musculus/rnaseq_expression/SRP254919.contrasts.csv'
-    pathway = "propd,propd_fdr,propd_grea,propr"
+    pathway = "propd,propr,cor,propd_grea"
 
     // some pathways are not included in the test, because they don't make sense to test for this dataset
     // for example propd_fdr don't give significant results on this dataset, and the permutation will be scaped