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Fix comBGC: parsing multiple antiSMASH files #1306

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Fix comBGC: parsing multiple antiSMASH files

Fix comBGC: parsing multiple antiSMASH files #1306

Triggered via pull request July 24, 2024 16:23
@jasmezzjasmezz
opened #407
fix-combgc-parsing
Status Success
Total duration 40m 36s
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ci.yml

on: pull_request
Choose nextflow versions to test against depending on target branch
0s
Choose nextflow versions to test against depending on target branch
Matrix: nf-test
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12 warnings
nf-test (latest-everything, test_nothing, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_bakta, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_prokka, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_preannotated, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_bgc_prokka, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_bgc_bakta, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_bgc_pyrodigal, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_preannotated_bgc, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_taxonomy_prokka, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_taxonomy_pyrodigal, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
nf-test (latest-everything, test_taxonomy_bakta, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/