Fix hamronization fargene input #1336
jasmezzci.yml
on: pull_request
Choose nextflow versions to test against depending on target branch
0s
Matrix: nf-test
Annotations
14 errors and 12 warnings
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nf-test (latest-everything, test_prokka, docker)
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nf-test (latest-everything, test_prokka, docker)
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nf-test (latest-everything, test_taxonomy_prokka, docker)
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nf-test (latest-everything, test_taxonomy_prokka, docker)
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nf-test (latest-everything, test, docker)
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nf-test (latest-everything, test, docker)
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nf-test (latest-everything, test_taxonomy_bakta, docker)
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nf-test (latest-everything, test_taxonomy_bakta, docker)
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nf-test (latest-everything, test_bakta, docker)
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nf-test (latest-everything, test_bakta, docker)
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nf-test (latest-everything, test_preannotated, docker)
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nf-test (latest-everything, test_preannotated, docker)
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nf-test (latest-everything, test_taxonomy_pyrodigal, docker)
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nf-test (latest-everything, test_taxonomy_pyrodigal, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test_prokka, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_taxonomy_prokka, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_taxonomy_bakta, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_bakta, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_preannotated, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_nothing, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_taxonomy_pyrodigal, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_bgc_prokka, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_bgc_bakta, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_bgc_pyrodigal, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_preannotated_bgc, docker)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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