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Modules update incl. fixing pigz in Pyrodigal #894

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Modules update incl. fixing pigz in Pyrodigal

Modules update incl. fixing pigz in Pyrodigal #894

Run time

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Job Run time
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prodigal)
29m 19s
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prokka)
13m 17s
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool bakta --annotatio...
30m 5s
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool prodigal)
21m 26s
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool prokka)
15m 49s
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool bakta -...
20m 44s
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prodigal)
50m 37s
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prokka)
49m 25s
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool bakta --annotation_bakta_d...
53m 50s
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prodigal)
49m 21s
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prokka)
48m 14s
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool bakta --annotati...
1h 11m 52s
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool bakta --annotatio...
1m 8s
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool prodigal)
56s
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool prokka)
1m 2s
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool pyrodigal)
52s
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool bakta -...
1m 8s
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool prodigal)
1m 7s
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool prokka)
1m 8s
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool pyrodigal)
1m 5s
7h 42m 25s