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Merge pull request #302 from nf-core/remove-none-from-schema #902

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Merge pull request #302 from nf-core/remove-none-from-schema

Merge pull request #302 from nf-core/remove-none-from-schema #902

Triggered via push August 9, 2023 10:19
@jasmezzjasmezz
pushed 0cc3d5a
dev
Status Cancelled
Total duration 6m 13s
Artifacts –

ci.yml

on: push
Matrix: Run pipeline with test data (AMP and ARG workflows)
Matrix: Run pipeline with test data (BGC workflow)
Matrix: Run pipeline with test data (DeepARG only workflow)
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26 errors and 14 warnings
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool prodigal)
Process completed with exit code 1.
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool pyrodigal)
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool prokka)
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool bakta -...
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool bakta --annotatio...
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool pyrodigal)
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool prokka)
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool prodigal)
The operation was canceled.
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool prodigal)
Canceling since a higher priority waiting request for 'nf-core CI-refs/heads/dev' exists
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool prodigal)
The operation was canceled.
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool bakta -...
Canceling since a higher priority waiting request for 'nf-core CI-refs/heads/dev' exists
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool bakta -...
The operation was canceled.
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prodigal)
The operation was canceled.
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool bakta --annotati...
The operation was canceled.
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prodigal)
Canceling since a higher priority waiting request for 'nf-core CI-refs/heads/dev' exists
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prodigal)
The operation was canceled.
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prokka)
The operation was canceled.
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool prokka)
Canceling since a higher priority waiting request for 'nf-core CI-refs/heads/dev' exists
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool prokka)
The operation was canceled.
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prokka)
The operation was canceled.
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prokka)
Canceling since a higher priority waiting request for 'nf-core CI-refs/heads/dev' exists
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prokka)
The operation was canceled.
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prodigal)
The operation was canceled.
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool bakta --annotatio...
Canceling since a higher priority waiting request for 'nf-core CI-refs/heads/dev' exists
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool bakta --annotatio...
The operation was canceled.
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool bakta --annotation_bakta_d...
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool prodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool pyrodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool prokka)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool bakta --annotatio...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool bakta -...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool pyrodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool prokka)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool prodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool bakta --annotati...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prokka)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prokka)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool bakta --annotation_bakta_d...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/