Skip to content
nf-core CI

Modules updates: Bakta, AMRFinderPlus, and MultiQC #924

Sign in to view logs

Modules updates: Bakta, AMRFinderPlus, and MultiQC

Modules updates: Bakta, AMRFinderPlus, and MultiQC #924

Re-run triggered September 27, 2023 09:59
@jasmezzjasmezz
#308
modules_update
Status Failure
Total duration 13m 24s
Artifacts –

ci.yml

on: pull_request
Matrix: Run pipeline with test data (AMP and ARG workflows)
Matrix: Run pipeline with test data (BGC workflow)
Matrix: Run pipeline with test data (DeepARG only workflow)
Fit to window
Zoom out
Zoom in

Annotations

20 errors and 10 warnings
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool bakta --annotati...
Process completed with exit code 1.
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prodigal)
Process completed with exit code 1.
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool bakta -...
Process completed with exit code 1.
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool prodigal)
Process completed with exit code 1.
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool prokka)
The job was canceled because "latest-everything_--annot" failed.
Run pipeline with test data (AMP and ARG workflows) (latest-everything, --annotation_tool prokka)
Process completed with exit code 1.
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prokka)
The operation was canceled.
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prokka)
The operation was canceled.
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prodigal)
The operation was canceled.
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool bakta --annotation_bakta_d...
The operation was canceled.
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prodigal)
The job was canceled because "latest-everything_--annot" failed.
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prodigal)
The operation was canceled.
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prokka)
The job was canceled because "latest-everything_--annot" failed.
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool prokka)
The operation was canceled.
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool bakta --annotatio...
The job was canceled because "latest-everything_--annot" failed.
Run pipeline with test data (AMP and ARG workflows) (23.04.0, --annotation_tool bakta --annotatio...
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool pyrodigal)
Process completed with exit code 1.
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool bakta --annotatio...
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool bakta -...
The operation was canceled.
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool pyrodigal)
The operation was canceled.
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool bakta --annotati...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (latest-everything, --annotation_tool prokka)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prokka)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool prodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC workflow) (23.04.0, --annotation_tool bakta --annotation_bakta_d...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool pyrodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool bakta --annotatio...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (latest-everything, --annotation_tool bakta -...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (DeepARG only workflow) (23.04.0, --annotation_tool pyrodigal)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/