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Update changelog
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jasmezz committed Jul 28, 2023
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Expand Up @@ -8,16 +8,21 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### `Added`

- [#290](https://github.com/nf-core/funcscan/pull/290) Merged pipeline template of nf-core/tools version 2.9, updated references. (by @jfy133)
- [#285](https://github.com/nf-core/funcscan/pull/285) Use nf-validation for samplesheet checking and added support for `fna.gz` input FASTA files (by @louperelo, @mirpedrol, @jfy133)
- [#295](https://github.com/nf-core/funcscan/pull/295) Add Prokka to MultiQC output (by @louperelo)
- [#285](https://github.com/nf-core/funcscan/pull/285) Use nf-validation for samplesheet checking and added support for `fna.gz` input FASTA files. (by @louperelo, @mirpedrol, @jfy133)
- [#295](https://github.com/nf-core/funcscan/pull/295) Add Prokka to MultiQC output. (by @louperelo)

### `Fixed`

- [#296](https://github.com/nf-core/funcscan/pull/296) Fixed empty output when saving prodigal annotations. (reported by @louperelo, fix by @jasmezz)
- [#297](https://github.com/nf-core/funcscan/pull/297) Added check for empty annotation files prior going into screening. (❤️ to @alexhbnr for requesting, added by @jfy133)
- [#299](https://github.com/nf-core/funcscan/pull/299) Fixed pigz error with symlinks in Pyrodigal, updated other modules: comBGC, FastQC, GECCO, gunzip, untar. (by @jasmezz)

### `Dependencies`

| Tool | Previous version | New version |
| ----- | ---------------- | ----------- |
| GECCO | 0.9.2 | 0.9.8 |

### `Deprecated`

## v1.1.2 - [2023-06-30]
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