Nextflow stdout:

ERROR ~ Error executing process > 'NFCORE_FUNCSCAN:FUNCSCAN:AMP:DRAMP_DOWNLOAD'

Caused by:
  Process `NFCORE_FUNCSCAN:FUNCSCAN:AMP:DRAMP_DOWNLOAD` terminated with an error exit status (1)


Command executed:

  mkdir amp_ref_database/
  ampcombi_download.py
  
  cat <<-END_VERSIONS > versions.yml
  "NFCORE_FUNCSCAN:FUNCSCAN:AMP:DRAMP_DOWNLOAD":
      ampcombi: $(ampcombi --version | sed 's/ampcombi //')
  END_VERSIONS

Command exit status:
  1

Command output:
  (empty)

Command error:
  32ac20ce48fd: Pulling fs layer
  bd9ddc54bea9: Waiting
  32ac20ce48fd: Waiting
  ca7680d1025d: Verifying Checksum
  ca7680d1025d: Download complete
  bd9ddc54bea9: Verifying Checksum
  bd9ddc54bea9: Download complete
  ca7680d1025d: Pull complete
  bd9ddc54bea9: Pull complete
  32ac20ce48fd: Verifying Checksum
  32ac20ce48fd: Download complete
  32ac20ce48fd: Pull complete
  Digest: sha256:e146a1e61af09d923f2dc7bd63ea8fa43b1c1aca18e139edeaf0f2da0720647f
  Status: Downloaded newer image for quay.io/biocontainers/ampcombi:0.2.2--pyhdfd78af_0
  Traceback (most recent call last):
    File "/usr/local/lib/python3.11/site-packages/requests/models.py", line 816, in generate
      yield from self.raw.stream(chunk_size, decode_content=True)
    File "/usr/local/lib/python3.11/site-packages/urllib3/response.py", line 1040, in stream
      yield from self.read_chunked(amt, decode_content=decode_content)
    File "/usr/local/lib/python3.11/site-packages/urllib3/response.py", line 1184, in read_chunked
      self._update_chunk_length()
    File "/usr/local/lib/python3.11/site-packages/urllib3/response.py", line 1119, in _update_chunk_length
      raise ProtocolError("Response ended prematurely") from None
  urllib3.exceptions.ProtocolError: Response ended prematurely
  
  During handling of the above exception, another exception occurred:
  
  Traceback (most recent call last):
    File "/home/runner/work/funcscan/funcscan/bin/ampcombi_download.py", line 78, in <module>
      download_DRAMP("amp_ref_database")
    File "/home/runner/work/funcscan/funcscan/bin/ampcombi_download.py", line 30, in download_DRAMP
      r = requests.get(url, allow_redirects=True)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/usr/local/lib/python3.11/site-packages/requests/api.py", line 73, in get
      return request("get", url, params=params, **kwargs)
             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/usr/local/lib/python3.11/site-packages/requests/api.py", line 59, in request
      return session.request(method=method, url=url, **kwargs)
             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/usr/local/lib/python3.11/site-packages/requests/sessions.py", line 589, in request
      resp = self.send(prep, **send_kwargs)
             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/usr/local/lib/python3.11/site-packages/requests/sessions.py", line 747, in send
      r.content
    File "/usr/local/lib/python3.11/site-packages/requests/models.py", line 899, in content
      self._content = b"".join(self.iter_content(CONTENT_CHUNK_SIZE)) or b""
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/usr/local/lib/python3.11/site-packages/requests/models.py", line 818, in generate
      raise ChunkedEncodingError(e)
  requests.exceptions.ChunkedEncodingError: Response ended prematurely

Work dir:
  /home/runner/work/funcscan/funcscan/.nf-test/tests/c695303b4920bdf3902ed74a6265a3c/work/56/72578346b931e74a8ee51cd52f7a52

Tip: you can replicate the issue by changing to the process work dir and entering the command `bash .command.run`

 -- Check '/home/runner/work/funcscan/funcscan/.nf-test/tests/c695303b4920bdf3902ed74a6265a3c/meta/nextflow.log' file for details
ERROR ~ Pipeline failed. Please refer to troubleshooting docs: https://nf-co.re/docs/usage/troubleshooting

 -- Check '/home/runner/work/funcscan/funcscan/.nf-test/tests/c695303b4920bdf3902ed74a6265a3c/meta/nextflow.log' file for details
Nextflow stderr: