Nf core template merge 2.14.1 [will wait for 2.15 to merge the nf-core/tools template] #693
Triggered via pull request
September 17, 2024 11:36
yuukiiwa
Status
Failure
Total duration
2m 22s
Artifacts
–
ci.yml
on: pull_request
Matrix: Run parameter tests
Matrix: Run profile tests
Matrix: Run pipeline with test data
Annotations
21 errors and 3 warnings
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Run profile tests (test_nobc_nodx_noaln)
Process completed with exit code 1.
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Run parameter tests (--skip_qc)
Process completed with exit code 1.
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Run profile tests (test_nobc_nodx_vc)
The job was canceled because "test_nobc_nodx_noaln" failed.
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Run profile tests (test_nobc_nodx_vc)
Process completed with exit code 1.
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Run profile tests (test_nobc_dx)
The job was canceled because "test_nobc_nodx_noaln" failed.
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Run profile tests (test_nobc_dx)
Process completed with exit code 1.
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Run parameter tests (--skip_quantification)
The job was canceled because "_--skip_qc" failed.
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Run parameter tests (--skip_quantification)
Process completed with exit code 1.
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Run profile tests (test_nobc_nodx_stringtie)
The job was canceled because "test_nobc_nodx_noaln" failed.
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Run profile tests (test_nobc_nodx_stringtie)
Process completed with exit code 1.
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Run parameter tests (--skip_alignment)
The job was canceled because "_--skip_qc" failed.
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Run parameter tests (--skip_alignment)
Process completed with exit code 1.
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Run parameter tests (--aligner graphmap2)
The job was canceled because "_--skip_qc" failed.
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Run parameter tests (--aligner graphmap2)
The operation was canceled.
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Run profile tests (test_nobc_nodx_rnamod)
The job was canceled because "test_nobc_nodx_noaln" failed.
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Run profile tests (test_nobc_nodx_rnamod)
The operation was canceled.
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Run profile tests (test_bc_nodx)
The job was canceled because "test_nobc_nodx_noaln" failed.
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Run profile tests (test_bc_nodx)
The operation was canceled.
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Run pipeline with test data (23.04.0)
Process completed with exit code 1.
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Run pipeline with test data (latest-everything)
The job was canceled because "_23_04_0" failed.
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Run pipeline with test data (latest-everything)
Process completed with exit code 1.
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Run profile tests (test_nobc_nodx_noaln)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run parameter tests (--skip_qc)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run parameter tests (--skip_qc)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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