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fixed fasta output. Output adds to existing motif files for now, duplications may occur
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,16 @@ | ||
| >MN796298.1 - BoxB.0 | ||
| CAGCTGGTTAGAGCGCACGGCTG | ||
| >MN796298.1 - BoxB.1 | ||
| CAGCATCCAACCCTAAAAAAGAAGGAATGCTG | ||
| >MN796291.1 - BoxB.0 | ||
| CAGCTGGTTAGAGCGCACGGCTG | ||
| >MN796291.1 - BoxB.1 | ||
| CAGCATCCAACCCTAAAAAAGAAGGAATGCTG | ||
| >MN796287.1 - BoxB.0 | ||
| CAGCTGGTTAGAGCGCACGGCTG | ||
| >MN796287.1 - BoxB.1 | ||
| CAGCATCCAACCCTAAAAAAGAAGGAATGCTG | ||
| >MN796288.1 - BoxB.0 | ||
| CAGCTGGTTAGAGCGCACGGCTG | ||
| >MN796288.1 - BoxB.1 | ||
| CAGCATCCAACCCTAAAAAAGAAGGAATGCTG |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,20 @@ | ||
| >MN796287.1 - ITS_region | ||
| ATAGGGAGACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTCGTACAAGGGAAAACTGGAATAAAACTTTCAAACTATCTAGTCGGTTCGGAATAAGAGAGGAAACTCAGCTTATAGAAACAGACAAGGGCTATTAGCTCAGCTGGTTAGAGCGCACGGCTGATAACCGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCACCTGACCAAAAAGCTAAAAAAAGTCAATAAAAATCAAAAAATTGACAAAAGAGCCGAAAAAAGGAAAAAGATTCAGCATCCAACCCTAAAAAAGAAGGAATGCTGGATGAAAATCCAGTGAGAACCTTGAAAACTGCATAGAAAAAGAAAGAAAAGTCAGGTGTAAAAAACCGACCGAAAAAAAGGTCAAGCTACAAAGAGCTAACGGTGGATACCTAGGCACACAGAGGCGAAGA | ||
| >MN796287.1 - leader | ||
| ATAGGGA | ||
| >MN796287.1 - d1d1.0 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTC | ||
| >MN796287.1 - d1d1.1 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTC | ||
| >MN796287.1 - sp_d2d3_sp | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTCGTACAAGGGAAAACTGGAATAAAACTTTCAAACTATCTAGTCGGTTCGGAATAAGAGAGGAAACTCAGCTTATAGAAACAGACAA | ||
| >MN796287.1 - tRNA_ile | ||
| GGGCTATTAGCTCAGCTGGTTAGAGCGCACGGCTGATAACCGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCA | ||
| >MN796287.1 - BoxB.0 | ||
| CAGCTGGTTAGAGCGCACGGCTG | ||
| >MN796287.1 - BoxB.1 | ||
| CAGCATCCAACCCTAAAAAAGAAGGAATGCTG | ||
| >MN796287.1 - BoxA | ||
| GAAAACT | ||
| >MN796287.1 - D4 | ||
| ACTGCATAG |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,20 @@ | ||
| >MN796288.1 - ITS_region | ||
| ATAGGGAGACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTCGTGCAAGGGAAAACTGGAATAAAACTTTCAAACTATCTAGTCGGTTCGGAATAAGAGAGGAAACTCAGCTTATAGAAACAGACAAGGGCTATTAGCTCAGCTGGTTAGAGCGCACGGCTGATAACCGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCACCTGACCAAAAAGCTAAAGAAAGTCAATAAAAATCAAAGAATTGACAAAAGAGCCAAAAAAAGGAAAAAAGATTCAGCATCCAACCCTAAAAAAGAAGGAATGCTGGATGAAAATCCAGTGAGAACCTTGAAAACTGCATAGAAAAAGAAAGAAAAGTCAGGTGTAAAAAACCGACCGAAAAAAAAGGTCAAGCTACAAAGAGCTAACGGTGGATACCTAGGCACACAGAGGCGAAGA | ||
| >MN796288.1 - leader | ||
| ATAGGGA | ||
| >MN796288.1 - d1d1.0 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTC | ||
| >MN796288.1 - d1d1.1 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTC | ||
| >MN796288.1 - sp_d2d3_sp | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTCGTGCAAGGGAAAACTGGAATAAAACTTTCAAACTATCTAGTCGGTTCGGAATAAGAGAGGAAACTCAGCTTATAGAAACAGACAA | ||
| >MN796288.1 - tRNA_ile | ||
| GGGCTATTAGCTCAGCTGGTTAGAGCGCACGGCTGATAACCGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCA | ||
| >MN796288.1 - BoxB.0 | ||
| CAGCTGGTTAGAGCGCACGGCTG | ||
| >MN796288.1 - BoxB.1 | ||
| CAGCATCCAACCCTAAAAAAGAAGGAATGCTG | ||
| >MN796288.1 - BoxA | ||
| GAAAACT | ||
| >MN796288.1 - D4 | ||
| ACTGCATAG |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,20 @@ | ||
| >MN796291.1 - ITS_region | ||
| ATAGGGAGACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTCGTGCAAGGGAATAAAGGAATAAAACTTTCAAACTATCTAGTCGGTTCGGAATAAGAGAGGAAACTCAGCTTATAGAAACAGACAAGGGCTATTAGCTCAGCTGGTTAGAGCGCACGGCTGATAACCGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCACCTGACCAAAAAGCTAAAGAAAGTCAATAAAAATCAAAGAATTGACAAAAGAGCCAAAAAAAGGAAAAAAGATTCAGCATCCAACCCTAAAAAAGAAGGAATGCTGGATGAAAATCCAGTGAGAACCTTGAAAACTGCATAGAAAAAGAAAGAAAAGTCAGGTGTAAAAAACCGACCGAAAAAAAGGTCAAGCTACAAAGAGCTAACGGTGGATACCTAGGCACACAGAGGCGAAGA | ||
| >MN796291.1 - leader | ||
| ATAGGGA | ||
| >MN796291.1 - d1d1.0 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTC | ||
| >MN796291.1 - d1d1.1 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTC | ||
| >MN796291.1 - sp_d2d3_sp | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTCGTGCAAGGGAATAAAGGAATAAAACTTTCAAACTATCTAGTCGGTTCGGAATAAGAGAGGAAACTCAGCTTATAGAAACAGACAA | ||
| >MN796291.1 - tRNA_ile | ||
| GGGCTATTAGCTCAGCTGGTTAGAGCGCACGGCTGATAACCGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCA | ||
| >MN796291.1 - BoxB.0 | ||
| CAGCTGGTTAGAGCGCACGGCTG | ||
| >MN796291.1 - BoxB.1 | ||
| CAGCATCCAACCCTAAAAAAGAAGGAATGCTG | ||
| >MN796291.1 - BoxA | ||
| GAAAACT | ||
| >MN796291.1 - D4 | ||
| ACTGCATAG |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,20 @@ | ||
| >MN796298.1 - ITS_region | ||
| ATAGGGAGACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTCGTACAAGGGAAAACTGGAATAAAACTTTCAAACTATCTAGTCGGTTCGGAATAAGAGAGGAAACTCAGCTTATAGAAACAGACAAGGGCTATTAGCTCAGCTGGTTAGAGCGCACGGCTGATAACCGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCACCTGACCAAAAAGCTAAAAAAAGTCAATAAAAATCAAAAAATTGACAAAAGAGCCGAAAAAAGGAAAAAGATTCAGCATCCAACCCTAAAAAAGAAGGAATGCTGGATGAAAATCCAGTGAGAACCTTGAAAACTGCATAGAAAAAGAAAGAAAAGTCAGGTGTAAAAAACCGACCGAAAAAAAGGTCAAGCTACAAAGAGCTAACGGTGGATACCTAGGCACACAGAGGCGAAGA | ||
| >MN796298.1 - leader | ||
| ATAGGGA | ||
| >MN796298.1 - d1d1.0 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTC | ||
| >MN796298.1 - d1d1.1 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTC | ||
| >MN796298.1 - sp_d2d3_sp | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTCGTACAAGGGAAAACTGGAATAAAACTTTCAAACTATCTAGTCGGTTCGGAATAAGAGAGGAAACTCAGCTTATAGAAACAGACAA | ||
| >MN796298.1 - tRNA_ile | ||
| GGGCTATTAGCTCAGCTGGTTAGAGCGCACGGCTGATAACCGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCA | ||
| >MN796298.1 - BoxB.0 | ||
| CAGCTGGTTAGAGCGCACGGCTG | ||
| >MN796298.1 - BoxB.1 | ||
| CAGCATCCAACCCTAAAAAAGAAGGAATGCTG | ||
| >MN796298.1 - BoxA | ||
| GAAAACT | ||
| >MN796298.1 - D4 | ||
| ACTGCATAG |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,2 +1,16 @@ | ||
| >KJ746516.1 - d1d1 | ||
| GACAAACTGATCATGATGTC | ||
| >MN796298.1 - d1d1.0 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTC | ||
| >MN796298.1 - d1d1.1 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTC | ||
| >MN796291.1 - d1d1.0 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTC | ||
| >MN796291.1 - d1d1.1 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTC | ||
| >MN796287.1 - d1d1.0 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTC | ||
| >MN796287.1 - d1d1.1 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTC | ||
| >MN796288.1 - d1d1.0 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTC | ||
| >MN796288.1 - d1d1.1 | ||
| GACCGAATCCACTCGAATCTGAAAGCAAATAGCAAATAAGAAGAGAGTAGGTCAACCCAAGGTC |