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add 'synapses restricted to region' #755

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add 'synapses restricted to region' #755

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666e6bd
add synapses_restricted_to_region
Clare72 Aug 17, 2023
acf8f8d
add example of usage
Clare72 Aug 18, 2023
3029a67
add property chain
Clare72 Aug 18, 2023
d1d3201
Merge branch 'master' into synapses_restricted_to_region
Clare72 Aug 18, 2023
2998a24
amend creation annotations
Clare72 Aug 18, 2023
e98463a
Merge branch 'master' into synapses_restricted_to_region
Aug 18, 2023
1a2743d
making requested definition and comment fixes
Clare72 Sep 12, 2023
9fc674b
Merge branch 'master' into synapses_restricted_to_region
Clare72 Nov 2, 2023
fcf362a
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 1, 2024
b78074a
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 5, 2024
8a4307b
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 7, 2024
bca3793
use `terms:contributor` instead of `terms:creator`
anitacaron Feb 9, 2024
dfccb07
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 12, 2024
ae71628
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 12, 2024
09fb9ed
Merge branch 'master' into synapses_restricted_to_region
Clare72 Mar 22, 2024
7b4c1e0
Merge branch 'master' into synapses_restricted_to_region
Clare72 Jun 21, 2024
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13 changes: 13 additions & 0 deletions src/ontology/ro-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -560,6 +560,7 @@ Declaration(ObjectProperty(obo:RO_0013006))
Declaration(ObjectProperty(obo:RO_0013007))
Declaration(ObjectProperty(obo:RO_0013008))
Declaration(ObjectProperty(obo:RO_0013009))
Declaration(ObjectProperty(obo:RO_0013010))
Declaration(ObjectProperty(obo:RO_0014001))
Declaration(ObjectProperty(obo:RO_0015001))
Declaration(ObjectProperty(obo:RO_0015002))
Expand Down Expand Up @@ -6431,6 +6432,17 @@ AnnotationAssertion(rdfs:comment obo:RO_0013009 "Not restricting range to 'cell'
AnnotationAssertion(rdfs:label obo:RO_0013009 "sends synaptic output to cell"@en)
SubObjectPropertyOf(obo:RO_0013009 obo:RO_0002120)

# Object Property: obo:RO_0013010 (synapses restricted to region)

AnnotationAssertion(obo:IAO_0000112 obo:RO_0013010 "An optic lobe intrinsic neuron has its synapses restricted to optic lobe neuropil.")
AnnotationAssertion(obo:IAO_0000115 obo:RO_0013010 "A relationship between a neuron and a region, where all of the functionally relevant input and output synapses are in that region.")
AnnotationAssertion(terms:contributor obo:RO_0013010 <https://orcid.org/0000-0002-1373-1705>)
AnnotationAssertion(terms:date obo:RO_0013010 "2023-08-17T12:17:24Z"^^xsd:dateTime)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:RO_0013010 "intrinsic to")
AnnotationAssertion(rdfs:comment obo:RO_0013010 "This relation may still be used if a very small number of synapses fall slightly outside the boundaries of the region, but any class using this relation should not have another restriction using this relation to another non-overlapping region.")
AnnotationAssertion(rdfs:label obo:RO_0013010 "synapses restricted to region"@en)
SubObjectPropertyOf(obo:RO_0013010 obo:RO_0013001)

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# Object Property: obo:RO_0014001 (disease has infectious agent)

AnnotationAssertion(obo:IAO_0000115 obo:RO_0014001 "A relationship between a disease and an infectious agent where the material basis of the disease is an infection with some infectious agent.")
Expand Down Expand Up @@ -7237,6 +7249,7 @@ SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013001 obo:BFO_0000050) obo:RO_0
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013002 obo:BFO_0000050) obo:RO_0013002)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013003 obo:BFO_0000050) obo:RO_0013003)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013007 obo:BFO_0000050) obo:RO_0013007)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013010 obo:BFO_0000050) obo:RO_0013010)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0015001 obo:RO_0015003) obo:RO_0015001)
SubObjectPropertyOf(ObjectPropertyChain(ObjectInverseOf(obo:BFO_0000066) obo:RO_0002234) obo:RO_0003000)
SubObjectPropertyOf(ObjectPropertyChain(ObjectInverseOf(obo:RO_0002176) obo:RO_0002176) obo:RO_0002170)
Expand Down
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