Format whitespace

tools/+ommtools/installMatBox.m

@@ -52,7 +52,7 @@ function installFromCommit()
 
     % Move to installation location
     [~, repoFolderName] = fileparts(unzippedFolder);
-    %targetFolder = fullfile(userpath, "Add-Ons");
+    % targetFolder = fullfile(userpath, "Add-Ons");
     targetFolder = fullfile(matlab.internal.addons.util.retrieveAddOnsInstallationFolder(), 'Toolboxes', 'Additional Software');
     targetFolder = fullfile(targetFolder, repoFolderName);
     if isfolder(targetFolder); rmdir(targetFolder, "s"); end

tools/+ommtools/projectdir.m

@@ -5,4 +5,4 @@
     L = dir(rootFolder);
     assert(all(contains( {'code', 'tools'}, {L.name})), ...
         'Expected project root directory to contain "code" and "tools" folder.');
-end
+end

tools/hooks/pre_commit.m

@@ -10,7 +10,7 @@
 end
 
 try
-    %ommtools.stylecheckToolbox %todo...
+    % ommtools.stylecheckToolbox %todo...
 catch %#ok<UNRCH>
     failed = [failed, "stylecheck"];
 end

tools/tasks/packageToolbox.m

@@ -8,7 +8,7 @@ function packageToolbox(releaseType, versionString)
 
     projectRootDirectory = ommtools.projectdir();
     % Not sure if this is needed:
-    run(fullfile(projectRootDirectory, 'code', 'startup.m')) 
+    run(fullfile(projectRootDirectory, 'code', 'startup.m'))
 
     % Specify toolbox path folders
     toolboxPathFolders = [...

tools/tests/oneOffs/organizationWithOneId.m

@@ -1,10 +1,10 @@
 function org = organizationWithOneId()
 % organizationWithOneId - test creation of a organization with one digital ID
-% 
-%  = organizationWithOneId()
 %
-% Creates an example Organization object. If the procedure fails, an error is
-% generated.
+%   o = organizationWithOneId()
+%
+%   Creates an example Organization object. If the procedure fails, an error is
+%   generated.
 %
 
     ror = openminds.core.RORID('identifier','https://ror.org/01xtthb56');

tools/tests/oneOffs/organizationWithTwoIds.m

@@ -1,10 +1,10 @@
 function org = organizationWithTwoIds()
 % organizationWithTwoIds - test creation of a organization with two digital IDs
-% 
-% o = organizationWithTwoIds()
 %
-% Creates an example Organization object. If the procedure fails, an error is
-% generated.
+%   o = organizationWithTwoIds()
+%
+%   Creates an example Organization object. If the procedure fails, an error is
+%   generated.
 %
 
     ror = openminds.core.RORID('identifier','https://ror.org/01xtthb56');

tools/tests/oneOffs/personArray.m

@@ -3,7 +3,6 @@
     filePath = fullfile(openminds.internal.rootpath, "livescripts", "data", "spacecraft_crew_members.csv");
     crewMembers = readtable(filePath, "TextType", "String");
 
-
     contacts = dictionary;
 
     for email = crewMembers.email'

tools/tests/oneOffs/personWithOneAffiliation.m

@@ -1,6 +1,6 @@
 function p = personWithOneAffiliation()
 % personWithOneAffiliation - test creation of a person object in openMINDS
-% 
+%
 % p = personWithOneAffiliation()
 %
 % Creates an example Person object. If the procedure fails, an error is
@@ -22,6 +22,3 @@
 p = openminds.core.Person('familyName','Smith','givenName','John D.',...
     'alternateName', "js", 'affiliation',af,'digitalIdentifier',orcid,...
     'contactInformation',contact);
-
-
-

tools/tests/oneOffs/personWithTwoAffiliations.m

@@ -1,6 +1,6 @@
 function p = personWithTwoAffiliations()
 % personWithTwoAffiliations - test creation of a person object in openMINDS
-% 
+%
 % p = personWithTwoAffiliations()
 %
 % Creates an example Person object. If the procedure fails, an error is
@@ -28,6 +28,3 @@
 p = openminds.core.Person('familyName','Smith','givenName','John D.',...
     'affiliation',af,'digitalIdentifier',orcid,...
     'contactInformation',contact);
-
-
-

tools/tests/oneOffs/propertyValueListWithNestedEmbeddings.m

@@ -6,7 +6,6 @@
 
     % Create a QuantitativeValue
 
-
     stringValue = openminds.core.research.StringProperty('name', 'MyParameter', 'value', 'A');
 
     ageUnit = openminds.controlledterms.UnitOfMeasurement('day');
@@ -17,4 +16,4 @@
     pvl = openminds.core.research.PropertyValueList('propertyValuePair', {stringValue, numberValue});
 
     disp(pvl)
-end
+end

tools/tests/testDocLinks.m

@@ -1,6 +1,6 @@
 function result = testDocLinks()
 % testDocLinks - Run test for openMINDS Read The Docs links
-    projectDirectory = ommtools.getProjectRootDir();    
+    projectDirectory = ommtools.getProjectRootDir();
 
     addpath( fullfile(projectDirectory, 'code') );
     addpath( fullfile(projectDirectory, 'code', 'internal') );
@@ -12,5 +12,3 @@
     testCase = testReadTheDocLinks();
     result = run(testCase);
 end
-
-

tools/tests/unitTests/ControlledInstanceTest.m

@@ -18,15 +18,14 @@ function testGetControlledInstanceLocal(testCase, instanceSpecification, version
 
             expectedIdUriPrefix = sprintf("%s/instances", openminds.constant.BaseURI(versionNumber));
             testCase.assertTrue(contains(jsonStr.at_id, expectedIdUriPrefix));
-
         end
 
         function testGetControlledInstanceRemote(testCase, instanceSpecification, versionNumber)
             jsonStr = openminds.internal.getControlledInstance(...
                 instanceSpecification{:}, versionNumber, "FileSource", "github");
 
             expectedIdUriPrefix = sprintf("%s/instances", openminds.constant.BaseURI(versionNumber));
-            testCase.assertTrue(contains(jsonStr.at_id, expectedIdUriPrefix));       
+            testCase.assertTrue(contains(jsonStr.at_id, expectedIdUriPrefix));
         end
     end
 end

tools/tests/unitTests/testInstanceSaveLoad.m

@@ -3,7 +3,7 @@
 
     % Automatically generate a test case for each schema type
     properties (TestParameter)
-        SchemaType = cellstr( enumeration('openminds.enum.Types') ); 
+        SchemaType = cellstr( enumeration('openminds.enum.Types') );
     end
 
     properties

tools/tests/unitTests/testLinkedCategory.m

@@ -5,11 +5,10 @@
     %
     %  [ ] Test hetereogeneous linked types.
     %  [ ] Test multiple nested linked categories.
-    %  [ ] Test assigning of properties to linked categories
+    %  [ ] Test assigning of properties to linked categories
     %   
     %  HOMOGENEOUS
 
-
     properties
         % DatasetWithOnePersonAuthor - A dataset instance with a single
         % author which is of type Person
@@ -20,7 +19,6 @@
         DatasetWithTwoPersonAuthor
     end
 
-
     methods(TestClassSetup)
         % Shared setup for the entire test class
 
@@ -77,9 +75,9 @@ function testRetrievePropertyOfNestedScalarHomogeneousType(testCase)
             testCase.assertClass(organizationName, "string")
 
             % Alternative: This does not work.
-            %thisAuthor = ds.author;
-            %thisOrganizationName = thisAuthor.affiliation.memberOf.fullName;
-        end 
+            % thisAuthor = ds.author;
+            % thisOrganizationName = thisAuthor.affiliation.memberOf.fullName;
+        end
 
         function testRetrievePropertyOfNestedNonScalarHomogeneousType(testCase)
             % Get dataset for testing
@@ -93,7 +91,7 @@ function testRetrievePropertyOfNestedNonScalarHomogeneousType(testCase)
 
             S = ds.author.affiliation; % Assert length of this is 3
             testCase.assertLength(S, 3)
-        end 
+        end
 
         function testRetrieveNonScalarHomogeneousType(testCase)
         % Test the retrieval of a linked type property which is a linked
@@ -155,7 +153,5 @@ function testRetreivePropertyOfScalarLinkedCategoryType(testCase)
                     'Failed to retrieve property from author')
             end
         end
-
     end
-
-end
+end