Component List v2.0

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Karl W. Schulz edited this page Oct 5, 2020 · 6 revisions

This page summarizes the packaged components available in the OpenHPC repository. These components are organized by groupings based on their general functionality, and links point to where additional information can be obtained for each component. Note that many of the 3rd party community libraries that are pre-packaged with OpenHPC are built using multiple compiler and MPI families. In these cases, the underlying RPM package names include delimiters identifying the development environment for which each package build is targeted.

Administrative Tools:

conman http://dun.github.io/conman
docs https://github.com/openhpc/ohpc
examples https://github.com/openhpc/ohpc
genders https://github.com/chaos/genders
lmod-defaults https://github.com/openhpc/ohpc
lmod https://github.com/TACC/Lmod
losf https://github.com/hpcsi/losf
mrsh https://github.com/chaos/mrsh
nhc https://github.com/mej/nhc
pdsh https://github.com/chaos/pdsh
prun https://github.com/openhpc/ohpc
test-suite https://github.com/openhpc/ohpc/tests

Compiler Families:

gnu9-compilers http://gcc.gnu.org
Intel Compiler Compatibility Package https://github.com/openhpc/ohpc
Arm Compiler for Linux Compatability Package https://github.com/openhpc/ohpc

Development Tools:

EasyBuild https://easybuilders.github.io/easybuild
autoconf http://www.gnu.org/software/autoconf
automake http://www.gnu.org/software/automake
cmake https://cmake.org
hwloc http://www.open-mpi.org/projects/hwloc
libtool http://www.gnu.org/software/libtool
python3-mpi4py https://bitbucket.org/mpi4py/mpi4py
python3-numpy https://github.com/numpy/numpy
python3-scipy http://www.scipy.org
spack https://github.com/LLNL/spack
valgrind http://www.valgrind.org

IO Libraries:

adios http://www.olcf.ornl.gov/center-projects/adios
hdf5 http://www.hdfgroup.org/HDF5
netcdf-cxx http://www.unidata.ucar.edu/software/netcdf
netcdf-fortran http://www.unidata.ucar.edu/software/netcdf
netcdf http://www.unidata.ucar.edu/software/netcdf
phdf5 http://www.hdfgroup.org/HDF5
pnetcdf http://cucis.ece.northwestern.edu/projects/PnetCDF
sionlib http://www.fz-juelich.de/ias/jsc/EN/Expertise/Support/Software/SIONlib/_node.html

Lustre packages:

lustre-client https://wiki.whamcloud.com

MPI Runtime/Transport Families:

Intel MPI Compatibility Package https://github.com/openhpc/ohpc
libfabric http://www.github.com/ofiwg/libfabric
mpich http://www.mpich.org
mvapich2 http://mvapich.cse.ohio-state.edu
openmpi4 http://www.open-mpi.org
ucx http://www.openucx.org

Parallel Libraries:

boost http://www.boost.org
fftw http://www.fftw.org
hypre http://www.llnl.gov/casc/hypre
mfem http://mfem.org
mumps http://mumps.enseeiht.fr
opencoarrays http://www.opencoarrays.org
petsc http://www.mcs.anl.gov/petsc
scotch http://www.labri.fr/perso/pelegrin/scotch
scalapack http://www.netlib.org/lapack-dev
slepc http://slepc.upv.es
superlu_dist http://crd-legacy.lbl.gov/~xiaoye/SuperLU
trilinos https://trilinos.org

Performance Tools:

dimemas https://tools.bsc.es
extrae https://tools.bsc.es
geopm https://geopm.github.io
imb https://software.intel.com/en-us/articles/intel-mpi-benchmarks
likwid https://github.com/RRZE-HPC/likwid
msr-safe https://github.com/LLNL/msr-safe
omb http://mvapich.cse.ohio-state.edu/benchmarks
papi http://icl.cs.utk.edu/papi
paraver https://tools.bsc.es
pdtoolkit http://www.cs.uoregon.edu/Research/pdt
scalasca http://www.scalasca.org
scorep http://www.vi-hps.org/projects/score-p
tau http://www.cs.uoregon.edu/research/tau/home.php

Provisioning Tools:

warewulf http://warewulf.lbl.gov

Resource Management:

Runtimes:

charliecloud https://hpc.github.io/charliecloud
singularity https://www.sylabs.io/singularity

Serial / Threaded Libraries:

R http://www.r-project.org
gsl http://www.gnu.org/software/gsl
metis http://glaros.dtc.umn.edu/gkhome/metis/metis/overview
openblas http://www.openblas.net
plasma https://bitbucket.org/icl/plasma
superlu http://crd.lbl.gov/~xiaoye/SuperLU