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    17 repositories

    • CRLM

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Oct 27, 2024Oct 27, 2024

    • GUIDE

      Public
      Python
      •0•0•0•0•Updated Oct 21, 2024Oct 21, 2024

    • H3DSG

      Public
      code for the H3-altered Diffuse Spinal cord Glioma project
      R
      •
      MIT License
      •0•0•0•0•Updated Sep 14, 2024Sep 14, 2024

    • CELLO2-analysis

      Public
      Analysis and figure code from Mu et al.
      R
      •0•0•0•0•Updated Aug 30, 2023Aug 30, 2023

    • BRCA-pCR

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jul 6, 2023Jul 6, 2023

    • MOPCR

      Public
      0•0•0•0•Updated May 25, 2023May 25, 2023

    • TMZscript

      Public
      Jupyter Notebook
      •2•0•0•0•Updated Feb 8, 2023Feb 8, 2023

    • METANET-analysis

      Public
      Analysis and figure code from Jiang et al.
      MATLAB
      •
      GNU General Public License v3.0
      •4•3•0•0•Updated Feb 20, 2022Feb 20, 2022

    • denovoSAVI

      Public
      Python
      •0•1•0•0•Updated Aug 19, 2021Aug 19, 2021

    • LEMONADE

      Public
      LEMONADE: Low-frEquency soMatic mutatiON cAlling using Deep sEquencing
      MATLAB
      •0•0•0•0•Updated Aug 18, 2021Aug 18, 2021

    • CELLO

      Public
      [source] CELLO - Cancer EvoLution toolbox for LOngitudinal data
      genomicsevolutioncancer
      MATLAB
      •7•15•0•0•Updated Aug 24, 2020Aug 24, 2020

    • ntcirseq

      Public
      [source] In-house python script for detecting non-tandem repeats in cir-seq data
      genomics
      Python
      •1•1•0•0•Updated Jul 6, 2020Jul 6, 2020

    • xgboost_tutorial

      Public
      A tutorial on xgboost
      R
      •0•0•0•0•Updated May 11, 2020May 11, 2020

    • FLORA

      Public
      [source] Functional Long-noncoding RNA Assembly Workflow
      Python
      •
      MIT License
      •3•4•0•0•Updated Jan 21, 2020Jan 21, 2020

    • CNAPE

      Public
      [Source] CNAPE: A Software for Copy Number Alteration Prediction from Gene Expression in Human Cancers
      R
      •5•6•1•0•Updated Jun 18, 2019Jun 18, 2019

    • wsi-pro

      Public
      [source] wsi image processing workflow
      MIT License
      •0•3•0•0•Updated Sep 26, 2018Sep 26, 2018

    • SAVI

      Public
      [forked] SAVI - statistical algorithm for variant identification
      C++
      •5•5•0•0•Updated Sep 22, 2018Sep 22, 2018