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  1. facets2n facets2n Public

    Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ratio calculations

    R 6 4

  2. cumc_risk_calculator cumc_risk_calculator Public

    Shiny application to calculate risk score from model params

    R 1

  3. beyonce beyonce Public

    Forked from dill/beyonce

    👑 🐝 📊 Beyoncé colour palettes for R

    R 1

  4. oncoPrintr oncoPrintr Public

    Forked from ahmetz/oncoPrintr

    R package to generate onco prints of genomic and clinical data of patient cohorts

    R

  5. vcf2maf vcf2maf Public

    Forked from mskcc/vcf2maf

    Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

    Perl

  6. msisensor msisensor Public

    Forked from ding-lab/msisensor

    microsatellite instability detection using tumor only or paired tumor-normal data

    C++