conda

Retreive within_group from mdata OR adata #123

	name: conda

	on:
	push:
	branches: [main]
	pull_request:
	branches: [main]

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	test:
	runs-on: ${{ matrix.os }}
	defaults:
	run:
	shell: bash -e {0} # -e to fail on error

	strategy:
	fail-fast: false
	matrix:
	include:
	- os: ubuntu-latest
	python: "3.9"

	env:
	OS: ${{ matrix.os }}
	PYTHON: ${{ matrix.python }}

	steps:
	- uses: actions/checkout@v3

	- name: Setup Miniconda
	uses: conda-incubator/setup-miniconda@v2
	with:
	miniforge-variant: Mambaforge
	miniforge-version: latest
	channels: conda-forge,bioconda
	channel-priority: strict
	python-version: ${{ matrix.python-version }}

	- name: install conda build
	# TODO pinning conda-build version because it stopped working for no good reason in 3.25 or 3.26.
	run: \|
	mamba install -y conda-build=3.24.0 conda-verify
	shell: bash

	- name: build and test package
	run: \|
	cd .conda
	mamba build --no-anaconda-upload .
	shell: bash

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