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CosMX reader with stitching #137

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quentinblampey
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Adding stitching to the CosMX reader. It's also possible to load one FOV only (if desired), and reading the proteins has also been added.

This is still a very early version of the reader, and it lacks the things below, but I made the PR so that we can start a discussion.

  • Update CHANGELOG
  • Add all constants in CosmxKeys
  • Add labels to the SpatialData object
  • Update the docstrings (this comes from Sopa, and has not been updated yet)
  • Adding some tests?

@LucaMarconato LucaMarconato marked this pull request as draft May 29, 2024 12:02
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