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Public pRF implementations
Garikoitz Lerma-Usabiaga edited this page Jan 7, 2020
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This is the list of pRF analysis tool implementations that we could gather. If you develop a new pRF analysis tool or know another tool not on this list, please send us a note and we will update.
| Project Name | Code repository | Our container implementation |
|---|---|---|
| mrVista | http://github.com/vistalab/vistasoft | http://hub.docker.com/repository/docker/garikoitz/prfanalyze-vista |
| analyzePRF | http://github.com/kendrickkay/analyzeprf | http://hub.docker.com/repository/docker/garikoitz/prfanalyze-aprf |
| AFNI | http://github.com/afni/afni | http://hub.docker.com/repository/docker/garikoitz/prfanalyze-afni |
| Popeye | http://github.com/kdesimone/popeye | http://hub.docker.com/repository/docker/garikoitz/prfanalyze-popeye |
| BayesPRF | http://github.com/pzeidman/BayespRF | |
| SamSrF 6 | http://osf.io/2rgsm/ | |
| University of Washington | http://github.com/kellychang4/pRF | |
| mrTools | http://gru.stanford.edu/doku.php/mrTools/tutorialsprf | |
| DeepPRF | www.biorxiv.org/content/10.1101/732990v1 |
The containers can be used with Docker or Singularity. This is an example command line to convert from Docker to Singularity:
singularity build container_name.sif docker://garikoitz/container_name:tag
or go to https://github.com/singularityhub/docker2singularity