Public pRF implementations

This is the list of pRF analysis tool implementations that we could gather. If you develop a new pRF analysis tool or know another tool not on this list, please send us a note and we will update.

mrVista

• Code repository: http://github.com/vistalab/vistasoft
• Our container implementation (prf-Analyze-mrvista): https://hub.docker.com/repository/docker/garikoitz/prfanalyze-vista

analyzePRF

• Code repository: https://github.com/kendrickkay/analyzeprf
• Our container implementation (prf-Analyze-analyzeprf): https://hub.docker.com/repository/docker/garikoitz/prfanalyze-aprf

AFNI

• Code repository: https://github.com/afni/afni
• Our container implementation (prf-Analyze-afni): https://hub.docker.com/repository/docker/garikoitz/prfanalyze-afni

Popeye

• Code repository: https://github.com/kdesimone/popeye
• Our container implementation (prf-Analyze-popeye): https://hub.docker.com/repository/docker/garikoitz/prfanalyze-popeye

BayesPRF

• Code repository: https://github.com/pzeidman/BayespRF

SamSrF 6

• Code repository: https://osf.io/2rgsm/

University of Washington

• Code repository: https://github.com/kellychang4/pRF

mrTools

• Code repository: http://gru.stanford.edu/doku.php/mrTools/tutorialsprf

DeepPRF

• Code repository: https://www.biorxiv.org/content/10.1101/732990v1

Docker and Singularity

The containers can be used with Docker or Singularity. This is an example command line to convert from Docker to Singularity:

singularity build container_name.sif docker://garikoitz/container_name:tag