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NEXUS Personalized Health Technologies

ETH Technology Platform for Personalized Health

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  1. scAmpi_single_cell_RNA scAmpi_single_cell_RNA Public

    Code related to scRNA analysis using the scAmpi workflow

    R 24 8

  2. TMARKER TMARKER Public archive

    TMARKER is a software for cancer cell nucleus detection, segmentation, counting, and classification.

    HTML 13 7

  3. gExcite_pipeline gExcite_pipeline Public

    single-cell Gene and AnTibody Expression pipeline

    R 2 1

  4. container_workflow container_workflow Public

    Building Containerized Workflows using different workflow engines

    Python 2

  5. smnrp smnrp Public

    Secure Multifunctional Nginx Reverse Proxy

    HTML 2 1

  6. ena_upload_ms ena_upload_ms Public

    Python 2

Repositories

Showing 10 of 44 repositories
  • snakemake-report-plugin-custom Public

    A custom report plugin for snakemake workflows

    ETH-NEXUS/snakemake-report-plugin-custom’s past year of commit activity
    Python 0 0 0 0 Updated Sep 19, 2024
  • basic_snakemake_workflow Public

    A self contained snakemake workflow to test new features

    ETH-NEXUS/basic_snakemake_workflow’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 19, 2024
  • scAmpi_single_cell_RNA Public

    Code related to scRNA analysis using the scAmpi workflow

    ETH-NEXUS/scAmpi_single_cell_RNA’s past year of commit activity
    R 24 GPL-3.0 8 1 2 Updated Sep 16, 2024
  • smnrp Public

    Secure Multifunctional Nginx Reverse Proxy

    ETH-NEXUS/smnrp’s past year of commit activity
    HTML 2 1 2 0 Updated Sep 12, 2024
  • gExcite_pipeline Public

    single-cell Gene and AnTibody Expression pipeline

    ETH-NEXUS/gExcite_pipeline’s past year of commit activity
    R 2 GPL-3.0 1 0 2 Updated Sep 2, 2024
  • nexus-data-management-tools Public

    Contains tools used for dataman

    ETH-NEXUS/nexus-data-management-tools’s past year of commit activity
    Python 0 0 0 0 Updated Aug 26, 2024
  • aebc2_website Public

    Source code for AEBC2 website on www.aebc2.eu

    ETH-NEXUS/aebc2_website’s past year of commit activity
    Ruby 0 0 0 0 Updated Aug 19, 2024
  • civicutils Public

    Python package for querying, matching and downstream processing of CIViC information

    ETH-NEXUS/civicutils’s past year of commit activity
    Python 1 GPL-3.0 0 1 1 Updated Aug 15, 2024
  • nexus-se-docs Public

    The central docs repository for all things related to software engineering and internal SE tools

    ETH-NEXUS/nexus-se-docs’s past year of commit activity
    Shell 1 MIT 0 0 0 Updated Aug 7, 2024
  • nexus-app-stack-contrib Public
    ETH-NEXUS/nexus-app-stack-contrib’s past year of commit activity
    Python 1 Apache-2.0 0 1 1 Updated Aug 6, 2024
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