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15 Open 39 Closed
15 Open 39 Closed
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Issues list

Strange truncation of fastq files when demultiplexing short Illumina inserts libraries
#90 opened Aug 27, 2024 by j0n0curry
2
add sample indexes to report
#89 opened Aug 19, 2024 by FranBonath
2
add more metadata in the anglerfish report enhancement New feature or request
#88 opened Aug 19, 2024 by FranBonath 1.0.0
3
A more lenient lenient mode enhancement New feature or request
#80 opened Apr 4, 2024 by remiolsen 1.0.0
More opinionated checks and warnings pushed to the anglerfish report enhancement New feature or request
#79 opened Mar 13, 2024 by remiolsen 1.0.0
Update PyPi build-and-publish github action invalid This doesn't seem right
#78 opened Feb 16, 2024 by remiolsen
Explore command should compare adaptor sequences and collapse results for identical ones
#74 opened Feb 13, 2024 by alneberg
Tidy up paf stats and umatch and match counts bug Something isn't working
#66 opened Jan 25, 2024 by remiolsen 1.0.0
Report the total number of unmatched reads enhancement New feature or request
#64 opened Jan 24, 2024 by remiolsen 1.0.0
Add support for .bam input enhancement New feature or request low priority
#60 opened Jan 19, 2024 by remiolsen
Samplesheet-free mode enhancement New feature or request
#57 opened Jan 12, 2024 by remiolsen 1.0.0
1
Write extensive documentation enhancement New feature or request
#51 opened Nov 28, 2023 by remiolsen
4 tasks
1.0.0
Parse ONT metadata from fastq files enhancement New feature or request low priority
#46 opened Nov 2, 2023 by remiolsen
Use custom adaptor templates from command-line enhancement New feature or request
#42 opened Sep 13, 2023 by remiolsen
Output: Simulate illumina reads
#8 opened Apr 16, 2020 by ewels
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