roslin_copy_ouputs will copy the bam index files as well

mskcc · Dec 19, 2017 · 104b116 · 104b116
1 parent 67b4458
commit 104b116
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/bin/roslin_copy_outputs.py b/bin/roslin_copy_outputs.py
@@ -233,7 +233,8 @@ def copy_outputs(cmo_project_id, job_uuid, toil_work_dir, user_out_dir):
     data = {
         "bam": {
             "patterns": [
-                "outputs/*.bam"
+                "outputs/*.bam",
+                "outputs/*.bai"
             ],
             "parallels": 5
         },