Important! Template update for nf-core/tools v3.0.2 #1375
GitHub Actions / JUnit Test Report
failed
Oct 23, 2024 in 0s
1 tests run, 0 passed, 0 skipped, 1 failed.
Annotations
Check failure on line 1 in Test pipeline: NFCORE_FUNCSCAN
github-actions / JUnit Test Report
Test pipeline: NFCORE_FUNCSCAN.test_bakta_profile
Assertion failed:
20 of 22 assertions failed
Raw output
Nextflow stdout:
ERROR ~ Module compilation error
- file : /home/runner/work/funcscan/funcscan/./workflows/../subworkflows/local/utils_nfcore_funcscan_pipeline/main.nf
- cause: Unexpected character: '"' @ line 215, column 35.
].join(' ').trim().replaceAll(", \.", ".")
^
1 error
-- Check script '/home/runner/work/funcscan/funcscan/./workflows/funcscan.nf' at line: 11 or see '/home/runner/work/funcscan/funcscan/.nf-test/tests/e8b0b57893b8ff63c6f7edffc52c6711/meta/nextflow.log' file for more details
Nextflow stderr:
Nextflow 24.04.4 is available - Please consider updating your version to it
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