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319 Open 7,635 Closed
319 Open 7,635 Closed
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Issues list

RAW DATA FOR PBMCs in Seurat V5
#9407 opened Oct 16, 2024 by singhd6
Reproducing scVI result in Seurat v5 vignette documentation Error in documentation
#9406 opened Oct 16, 2024 by shwong-tw
Banksy Code error: order(labels.loc[, id]) : argument 1 is not a vector bug Something isn't working
#9404 opened Oct 16, 2024 by salasd
Warning message: “package ‘Seurat’ was built under R version 4.3.2” documentation Error in documentation
#9402 opened Oct 15, 2024 by ASNbioinf
Scaling on Variable Features only and all Features yields different UMAP projections on subsampled or split data bug Something isn't working
#9401 opened Oct 15, 2024 by JurMich
Unable to reproduce tutorial - Seurat - Guided Clustering Tutorial
#9399 opened Oct 14, 2024 by holiday01
6
bug about the definetion of RowVarSparse in RunPCA bug Something isn't working
#9396 opened Oct 12, 2024 by NormalLomo
Unable to load visium HD data using seurat
#9394 opened Oct 12, 2024 by Yijia-Jiang
1
Help with grouping of cells after integration
#9393 opened Oct 11, 2024 by hparaiso
ImageDimPlot() not plotting molecules on specific fovs created by Crop function bug Something isn't working
#9390 opened Oct 11, 2024 by elifozcelik
Parallelization in Seurat with future
#9385 opened Oct 10, 2024 by Motoufiq
Error in Ops.data.frame(guide_loc, panel_loc) :
#9383 opened Oct 10, 2024 by LiHangzls
Run harmony by calling IntegrateLayers - how to specify the batch covariate in meta.data?
#9382 opened Oct 9, 2024 by linpei26
2
Error in IntegrateLayers after subsetting Seurat object bug Something isn't working
#9381 opened Oct 9, 2024 by Katrine-klat
2
Will sequencing depth correction lower gene expression values in groups B and C if group A has much higher sequencing depth?
#9379 opened Oct 9, 2024 by Jiahuan90
2
Reclustering of spatial data in Seurat V5 not working
#9378 opened Oct 8, 2024 by JoyOtten
7
HTODemux not accurately classifying data?
#9377 opened Oct 8, 2024 by andreanperry
Get an expression table that matches what FoldChange function uses
#9376 opened Oct 8, 2024 by DelongZHOU
4
Integrating 10 visium Hd samples
#9374 opened Oct 8, 2024 by raygozag
1
Help with subset seurat object by a column in metadata bug Something isn't working
#9368 opened Oct 6, 2024 by Chrisdoan9
4
Error with IntegrateLayers
#9366 opened Oct 5, 2024 by JoyOtten
6
FindConservedMarkers function seems to ignore the "slot" argument bug Something isn't working
#9365 opened Oct 5, 2024 by jasonleongbio
3
FindTransferAnchors Warning: No layers found matching search pattern provided
#9364 opened Oct 4, 2024 by weishwu
1
PercentageFeatureSet not working with BPCells matrix bug Something isn't working
#9363 opened Oct 4, 2024 by oliviaellis65
1
Tutorial for Bridge Integration is missing reference files bug Something isn't working
#9362 opened Oct 4, 2024 by ekiernan
ProTip! Exclude everything labeled bug with -label:bug.