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Pull requests: scverse/scvi-tools

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Pull requests list

(feat) : Mudata support for MultiVI on-merge: backport to 1.2.x on-merge: backport to 1.2.x
#3038 opened Nov 6, 2024 by ori-kron-wis Loading… scvi-tools 1.2
@ori-kron-wis
1
[pre-commit.ci] pre-commit autoupdate on-merge: backport to 1.2.x on-merge: backport to 1.2.x
#3037 opened Nov 4, 2024 by pre-commit-ci bot Loading… scvi-tools 1.2
1
fix(train): in case of last batch <=2, move to validation if possible on-merge: backport to 1.2.x on-merge: backport to 1.2.x
#3036 opened Oct 31, 2024 by ori-kron-wis Loading… scvi-tools 1.2
1
@ori-kron-wis
1
feat: continuous, embedded covariates re-injected during training
#3032 opened Oct 27, 2024 by ori-kron-wis Loading… scvi-tools 1.2
@ori-kron-wis
15
Update _base_components.py
#3030 opened Oct 24, 2024 by canergen Loading…
1
Implement Decipher model in external cuda tests Run test suite on CUDA on-merge: backport to 1.2.x on-merge: backport to 1.2.x
#3015 opened Oct 15, 2024 by justjhong Loading…
12
Custom dataloader registry support custom_dataloader
#2932 opened Aug 7, 2024 by ori-kron-wis Loading… scvi-tools 1.3
1
@ori-kron-wis
44
feat(train) Add support for torch.compile (EXPERIMENTAL) cuda tests Run test suite on CUDA
#2931 opened Aug 7, 2024 by canergen Loading… scvi-tools 1.3
@ori-kron-wis
4
refactor(model): refactor out common minified mode methods cuda tests Run test suite on CUDA
#2883 opened Jul 3, 2024 by martinkim0 Loading… scvi-tools 1.2
@ori-kron-wis
3
style: add initial tensor shape typing to vae on-merge: backport to 1.2.x on-merge: backport to 1.2.x
#2868 opened Jun 28, 2024 by martinkim0 Loading… scvi-tools 1.2
1
@canergen
2
feat: support numpy 2.0
#2842 opened Jun 17, 2024 by martinkim0 Loading…
1
5
compute DE+ and DE- separately P0
#2826 opened Jun 3, 2024 by LevyNat Loading…
5
Poissonmultivi P2
#2735 opened Apr 18, 2024 by lauradmartens Loading…
@martinkim0
3
Fixes to pyro model initialisation & sampling [WIP] P1
#2695 opened Apr 7, 2024 by vitkl Loading…
@martinkim0
8
Adding model with cycle consistency and VampPrior cuda tests Run test suite on CUDA P1
#2421 opened Jan 19, 2024 by Hrovatin • Draft
1
99
Can hub paper P0
#2379 opened Jan 5, 2024 by canergen Loading…
3 of 4 tasks
9
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