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77 Open 130 Closed
77 Open 130 Closed
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Issues list

Multi-allelic SNVs and CNVs
#237 opened Sep 9, 2024 by katherinef
1
Expected vs Observed z-scores are not the same
#236 opened Aug 12, 2024 by tamil-acog
3
susie BLiP
#229 opened May 1, 2024 by jerome-f
1
Number of CSs
#228 opened May 1, 2024 by Xi-Cao
5
Model is not converging evena fter running for 10k iterations
#226 opened Apr 30, 2024 by akhilpampana
9
Susie with sparse LD matrices
#225 opened Apr 22, 2024 by nlapier2
3
Confirmation of the sample size value n
#224 opened Apr 21, 2024 by laleoarrow
4
Also encountered "The estimated prior variance is unreasonably large" using ieugwasr ld_matrix_local function to calculate the ld matrix
#223 opened Apr 11, 2024 by laleoarrow
20
refine takes long time to run for "small" datasets enhancement New feature or request
#222 opened Apr 8, 2024 by gaow
3
SuSiE can crash when run in small samples
#219 opened Feb 22, 2024 by william-denault
1
PIP tends to 1 by increasing sample size.
#218 opened Feb 16, 2024 by harryyiheyang
1
Feature request summary lbf
#216 opened Jan 18, 2024 by jerome-f
4
Is there any rules of thumb on how to set up the prior covariance matrix?
#215 opened Jan 1, 2024 by garyzhubc
whys lambda is so large
#212 opened Dec 13, 2023 by koujiaodahan
2
Does susieR work with very small p-values?
#211 opened Dec 11, 2023 by vforget
1
susie_plot file_prefix doesn't work
#209 opened Dec 11, 2023 by koujiaodahan
1
kriging_rss plot looks very different despite same processing
#207 opened Dec 4, 2023 by nickhir
7
missing value where TRUE/FALSE needed error with susie_rss
#206 opened Nov 22, 2023 by maguileraf
18
What pre-processing are required for SusieR? We don't need to remove LD but it looks like we need to centre our data?
#204 opened Nov 3, 2023 by garyzhubc
2
Is there any consistency guarantee between CS and joint PIP
#203 opened Oct 11, 2023 by garyzhubc
3
Notion of "inferential statement" in the paper
#202 opened Oct 10, 2023 by garyzhubc
8
Set log10bf to max if inf bug Something isn't working
#201 opened Oct 10, 2023 by jerome-f
33
is it acceptable to have pip=1 but posterior beta=0?
#200 opened Sep 26, 2023 by WeiCSong
4
Heteroskedasticity?
#198 opened Aug 15, 2023 by igrabski
4
Is it possible to test the hypothesis that the significant variants are in a set of SNPs?
#196 opened Jul 11, 2023 by garyzhubc
17
ProTip! Adding no:label will show everything without a label.