Skip to content

Issues: Bioconductor/BiocCheck

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

23 Open 140 Closed
23 Open 140 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

BiocCheck naive function line count penalizes good coding practices of commenting code and readable multiline code
#220 opened Jan 7, 2025 by omsai
BiocCheck looks and complains about the size of object files (.o, .so files). It shouldn't
#219 opened Dec 19, 2024 by hpages
7
listing of man pages with non-runnable examples includes non-exported functions
#218 opened Sep 10, 2024 by vjcitn
Add check for fnd role in DESCRIPTION file
#215 opened Aug 6, 2024 by LiNk-NY
@LiNk-NY
BiocCheck false positives
#201 opened Dec 20, 2023 by hpages
One test fails on PPC: Error in checkEqualsNumeric(9, .BiocCheck$getNum("warning")): Mean relative difference: 0.1111111
#188 opened Apr 4, 2023 by barracuda156
9
Make BiocCheck output legible.
#179 opened Nov 28, 2022 by nick-robo
2
NOTE: License 'LGPL (>= 3)' unknown; licenses cannot restrict use
#119 opened Jan 20, 2021 by hpages
9
Add dependency check
#113 opened Nov 3, 2020 by lshep
5
Ignore 'renv' files in relevant checks
#106 opened Oct 19, 2020 by kevinrue
':::' calls
#95 opened May 31, 2020 by llrs
Affiliation, location in DESCRIPTION file Intermediate Intermediate level Hackathon project
#83 opened May 18, 2020 by aedin
2
Encourage 'scholarly' attribution via NOTEs Advanced Advanced level Hackathon project Intermediate Intermediate level Hackathon project
#80 opened May 14, 2020 by mtmorgan
@mtmorgan
5
Full integration with codetoolsBioc Advanced Advanced level Hackathon project
#77 opened May 8, 2020 by federicomarini
@federicomarini
9
News file formatting Intermediate Intermediate level Hackathon project
#73 opened May 8, 2020 by lshep
6
description namespace consistency Intermediate Intermediate level Hackathon project question
#72 opened May 8, 2020 by lshep
Note: Unit test coverage amount Advanced Advanced level Hackathon project
#71 opened May 8, 2020 by lshep
8
non-trivial new classes should have a show method Advanced Advanced level Hackathon project
#70 opened May 8, 2020 by lshep
print() and cat() usage outside show and print methods for objects Advanced Advanced level Hackathon project
#69 opened May 8, 2020 by lshep
Downloading data from web should be cached Intermediate Intermediate level Hackathon project
#68 opened May 8, 2020 by lshep
2
Suggest Hubs when large data is present Beginner Beginner level Hackathon project
#67 opened May 8, 2020 by lshep
@const-ae
12
Warn (note?) on lack of Bioconductor interoperability Beginner Beginner level Hackathon project
#66 opened May 7, 2020 by mtmorgan
@mtmorgan
lintr style code check for Bioconductor Intermediate Intermediate level Hackathon project
#62 opened May 6, 2020 by nturaga
2
ProTip! Updated in the last three days: updated:>2025-01-04.